Bioinformatic Cloud Resources
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1. CloudBLAST
:Scalable BLAST in the cloud.
2. CloudBurst
:Highly sensitive short-read mapping.
3.Cloud RSD
:Reciprocal smallest distance ortholog detection.
4. Contrail
:De novo assembly of large genomes.
5.BFAST
:BFAST stands for "Blat-like Fast Accurate Search Tool ". "BFAST facilitates
the fast and accurate mapping of short reads to reference sequences ".
6. Crossbow
:Alignment and SNP genotyping.
7. Myrna (B.L., K. Hansen and J. Leek, unpublished data)
:Differential expression analysis
of mRNA-seq.
8.Quake (D.R. Kelley, M.C.S. and S.L.S., unpublished data)
:Quality guided
correction of short reads.
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Analysis environments and data sets
1. AWS Public Data
:Cloud copies of Ensembl, GenBank, 1000 Genomes and other data.
2. CLoVR
:Genome and metagenome annotation and analysis
3.Cloud BioLinux
:Genome assembly and alignment.
4. Galaxy
:Platform for interactive large-scale genome analysis.
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