Saturday, April 18, 2020

Basic Bioinformatics Terms on letter F

Basic Bioinformatics Terms on letter F <meta name="discription="content="Basic Bioinformatics Terms on letters A to Z. Solve it to check your knowledge of Bioinformatics."> <style type="text/css"> .collapsible { background-color: #5334eb; color: white; cursor: pointer; padding:5px; width: 26%; border: none; text-align: left; outline: none; font-size: 25px; } .active, .collapsible:hover { background-color: #db34eb; } .content { padding: 3px; display: none; overflow: hidden; width: 100%; background-color: #a2fca8; font-size: 25px; } </style> </head> <body> <div class="separator" style="clear: both; text-align: center;"> <a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjCrTyWDFc4E78dcAPp-HVoNiTm714nAQhEYeLMa7sRFrzjqVl5jToFjqe9eScqXvfWvOjf9jscLOWfHmieK5ydUjRXYl0H1e6Cbe2m22IBt6pmATvtizdecxQdXWntdD9n-nURvuvDfj8/s1600/1.jpg" imageanchor="1" style="clear: right; float: right; margin-bottom: 1em; margin-left: 1em;"><img border="0" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjCrTyWDFc4E78dcAPp-HVoNiTm714nAQhEYeLMa7sRFrzjqVl5jToFjqe9eScqXvfWvOjf9jscLOWfHmieK5ydUjRXYl0H1e6Cbe2m22IBt6pmATvtizdecxQdXWntdD9n-nURvuvDfj8/s320/1.jpg" width="320" height="200" data-original-width="400" data-original-height="250" title="Basic Bioinformatics Terms on letter F" alt="Basic Bioinformatics Terms on letter F" /></a></div> <p> <b> These Basic Bioinformatics Terms on letter - F. It can boost vocabulary in bioinformatics. It can also enhance basic knowledge of Bioinformatics. </b> </p> <br> <form name="quiz"> 1. <b>What is "FASTA "? </b> <ul style="margin-top: 1pt"> <button type="button" class="collapsible">View Answer</button> <div class="content"> <p> FASTA simple text format for DNA or protein. </p> </div> <br> </ul> <br> 2. <b> What is "Field"? </b> <ul style="margin-top: 1pt"> <br> <button type="button" class="collapsible">View Answer</button> <div class="content"> <p> Field - It is in the context of databases, a well-delimited part of an entry containing information of a precise nature (author, date, etc.). <br>You can normally search databases by explicitly targeting specific fields. </p> </div> </ul> <hr class="more" /> <br> 3. <b> What is "Fileserver"?</b> <ul style="margin-top: 1pt"> <br> <button type="button" class="collapsible">View Answer</button> <div class="content"> <p> Fileserver - It is a computer that provides files to other computers via a network. </p> </div> </ul> <br> 4. <b> What is "Finished sequence DNA"? </b> <ul style="margin-top: 1pt"> <br> <button type="button" class="collapsible">View Answer</button> <div class="content"> <p> Finished sequence DNA has been sequenced at least eight times and there are no gaps, and contains no more than 1 error in 10,000 base pairs.</p> </div> </ul> <br> 5. <b> What is "FPKM"? </b> <ul style="margin-top: 1pt"> <br> <button type="button" class="collapsible">View Answer</button> <div class="content"> <p> FPKM - these are Fragments Per Kilobase Of Exon Per Million Fragments Mapped; approximates the relative abundance of transcripts in terms of fragments observed from an RNAseq experiment. </p> </div> </ul> <br> 6. <b> What is "FTP"? </b> <ul style="margin-top: 1pt"> <br> <button type="button" class="collapsible">View Answer</button> <div class="content"> <p> FTP - It is a file transfer protocol, an internet protocol that defines a commend method of transferring files across networks and between remote computers. </p> </div> </ul> <br> <br> <script async src="//pagead2.googlesyndication.com/pagead/js/adsbygoogle.js"></script> <!-- Between Post_Rectangle_Ad --> <ins class="adsbygoogle" style="display:inline-block;width:300px;height:250px" data-ad-client="ca-pub-6325725335052758" data-ad-slot="5361047021"></ins> <script> (adsbygoogle = window.adsbygoogle || []).push({}); </script> <br> </form> <b> Basic Terms in Bioinformatics=> <h2> <a href="https://www.blogger.com/blogger.g?blogID=812213065205123104" style="color: blue; display: inline; text-align: left;"> A..</a> <a href="https://bioinformaticianneeraj.blogspot.com/2020/04/basic-bioinformatics-terms-on-letter-b.html" style="color: blue; display: inline; text-align: left;"> B..</a> <a href="https://bioinformaticianneeraj.blogspot.com/2020/04/basic-bioinformatics-terms-on-letter-c.html" style="color: blue; display: inline; text-align: left;"> C..</a> <a href="https://bioinformaticianneeraj.blogspot.com/2020/04/basic-bioinformatics-terms-on-letter-d.html" style="color: blue; display: inline; text-align: left;"> D..</a> <a href="https://bioinformaticianneeraj.blogspot.com/2020/04/basic-bioinformatics-terms-on-letter-e.html" style="color: blue; display: inline; text-align: left;"> E..</a> <a href="https://bioinformaticianneeraj.blogspot.com/2020/04/basic-bioinformatics-terms-on-letter-f.html" style="color: blue; display: inline; text-align: left;"> F..</a> </h2> </b> </body> <script> var coll = document.getElementsByClassName("collapsible"); var i; for (i = 0; i < coll.length; i++) { coll[i].addEventListener("click", function() { this.classList.toggle("active"); var content = this.nextElementSibling; if (content.style.display === "block") { content.style.display = "none"; } else { content.style.display = "block"; } }); } </script> </html>

Basic Bioinformatics Terms on letter E

Basic Bioinformatics Terms on letter E
Basic Bioinformatics Terms on letter E

These Basic Bioinformatics Terms on letter - E.It can boost vocabulary in bioinformatics. It can also enhance basic knowledge of Bioinformatics.


1. What is "E value"?

    E value (Expect value) - when performing a BLAST search, you will obtain an E-value for each sequence that is retrieved.
    An E-value can be thought of as the probability that two sequences are similar to each other by chance.
    Therefore E-values are best when they are small (e.g. 1 x 10-12).



2. What is "EC number"?

    EC number - It is Enzyme Commission number a numerical classification scheme for enzymes based on the chemical reactions they catalyze.

Basic Bioinformatics Terms on letter D

Basic Bioinformatics Terms on letter D
Basic Bioinformatics Terms on letter D
These Basic Bioinformatics Terms on letter D. It can boost vocabulary in bioinformatics. It can also enhance basic knowledge of Bioinformatics.
1. What is "Dendrogram"?
    Dendrogram - It is another name for phylogenetic tree. The ClustalW guide tree is often referred to as a dendrogram, it is a file with a .dnd extension.


2. What is "Distance matrix"?

    Distance matrix - It is a matrix that contains all the pairwise distances between sequences in a data set. Distance matrices afe often u sed to compute phylogenetic trees. Not a substitution matrix.

Friday, April 17, 2020

Basic Bioinformatics Terms on letter C

Basic Bioinformatics Terms on letter C
MCQs 1 on
These are Basic Bioinformatics Terms on letter C. These Basic Bioinformatics Terms on letter C. It can boost vocabulary in bioinformatics. It can also enhance basic knowledge of Bioinformatics.
1. What is "cDNA"?
    cDNA - It is Complementary DNA abbreviation used at NCBI to indicate which bases constitute the open reading frame.


2. What is "CDS"?

    CDS acronym for ‘coding sequences

Basic Bioinformatics Terms on letter B

Basic Bioinformatics Terms on letter A
MCQs 1 on
These are Basic Bioinformatics Terms on letter B. These Basic Bioinformatics Terms on letter B. It can boost vocabulary in bioinformatics. It can also enhance basic knowledge of Bioinformatics.
1. What is "Bacterial artificial chromosome(BAC)"?

    Bacterial artificial chromosome (BAC)- It is a cloning vector replicated in bacteria that can hold an insert of about 150,000 base pairs.



2. What is "BAM file "?

    BAM file - It is a binary version of a SAM file, the format is .bam.

Thursday, April 16, 2020

Basic Bioinformatics Terms on letter A

Basic Bioinformatics Terms on letter A
MCQs 1 on
These are Basic Bioinformatics Terms on letter A. These Basic Bioinformatics Terms on letter A. It can boost vocabulary in bioinformatics. It can also enhance basic knowledge of Bioinformatics.
1. What is "Accession number" ?
    Accession number identification number given to every DNA and protein sequence submitted to NCBI or equivalent database


2. What is "An Algorithm"?

    Algorithm step-by-step procedure for solving a problem (e.g. aligning two sequences) or computing a quantity (e.g. %GC). Typically written in Perl or another computer language.

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